<html><head><meta http-equiv="Content-Type" content="text/html; charset=us-ascii"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; line-break: after-white-space;" class="">On 3:<div class=""><br class=""></div><div class=""><a href="https://depth-first.com/articles/2020/05/04/stereochemistry-and-atom-parity-in-smiles/" class="">https://depth-first.com/articles/2020/05/04/stereochemistry-and-atom-parity-in-smiles/</a></div><div class=""><br class=""></div><div class=""><br class=""><div><br class=""><blockquote type="cite" class=""><div class="">On Oct 13, 2021, at 12:54 PM, Jon Zingale <<a href="mailto:jonzingale@gmail.com" class="">jonzingale@gmail.com</a>> wrote:</div><br class="Apple-interchange-newline"><div class=""><div dir="ltr" class=""><div class="gmail_default" style="font-family:verdana,sans-serif;font-size:small;color:#333333">Thanks Roger, Marcus. I am a newbie in this area and so it might be good for me to ask some potentially obvious questions about SMILES (since they are used everywhere).</div><div class="gmail_default" style="font-family:verdana,sans-serif;font-size:small;color:#333333"><br class=""></div><div class="gmail_default" style="font-family:verdana,sans-serif;font-size:small;color:#333333">1. Is the SMILES isomorphism problem equivalent to the graph isomorphism problem, or is there some advantage from being context free parsable?</div><div class="gmail_default" style="font-family:verdana,sans-serif;font-size:small;color:#333333"><br class=""></div><div class="gmail_default" style="font-family:verdana,sans-serif;font-size:small;color:#333333">2. In practice, do the edge cases that Roger mentioned effectively get added into the rewrite rules for the grammar or are they a separate kind of thing?</div><div class="gmail_default" style="font-family:verdana,sans-serif;font-size:small;color:#333333"><br class=""></div><div class="gmail_default" style="font-family:verdana,sans-serif;font-size:small;color:#333333">3. How is chirality handled?</div></div>
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